FastQCFastQC Report
Sat 10 May 2014
father.2_phred33.fastq

Summary

[OK] Basic Statistics

Measure Value
Filename father.2_phred33.fastq
File type Conventional base calls
Encoding Sanger / Illumina 1.9
Total Sequences 40546952
Filtered Sequences 0
Sequence length 90
%GC 48

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[OK] Per base sequence content

Per base sequence content

[OK] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[WARN] Sequence Duplication Levels

Duplication level graph

[OK] Overrepresented sequences

No overrepresented sequences

[WARN] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
GGAAG 8347820 2.5389779 5.140507 85-86
Produced by FastQC (version 0.10.1)